Hershberger Lab

Publications

2023

Sainfoin (Onobrychis spp.) crop ontology: supporting germplasm characterization and international research collaborations

Sainfoin (Onobrychis spp.) crop ontology: supporting germplasm characterization and international research collaborations

Ebrar Karabulut, Kübra Erkoç, Murat Acı, Mahmut Aydın, Spencer Barriball, …, Allison J. Miller, Matthew J. Rubin, Omar Tesdell, Brandon Schlautman, Muhammet Şakiroğlu

Frontiers in Plant Science · 15 May 2023 · doi:10.3389/fpls.2023.1177406

legumes data management

2022

Predicting starch content in cassava fresh roots using near-infrared spectroscopy

Predicting starch content in cassava fresh roots using near-infrared spectroscopy

Edwige Gaby Nkouaya Mbanjo, Jenna Hershberger, Prasad Peteti, Afolabi Agbona, Andrew Ikpan, …, Elizabeth Parkes, Peter Kulakow, Michael A. Gore, Chiedozie Egesi, Ismail Yusuf Rabbi

Frontiers in Plant Science · 08 Nov 2022 · doi:10.3389/fpls.2022.990250

spectroscopy cassava

Sweet Corn Transcriptome Pinpoints Vitamin Genes

Sweet Corn Transcriptome Pinpoints Vitamin Genes

CSA News · 03 May 2022 · doi:10.1002/csan.20750

transcriptomics sweet corn nutritional quality

Breedbase: a digital ecosystem for modern plant breeding

Breedbase: a digital ecosystem for modern plant breeding

Nicolas Morales, Alex C Ogbonna, Bryan J Ellerbrock, Guillaume J Bauchet, Titima Tantikanjana, …, Bert de Boeck, Hugo Campos, Rony Swennen, Jeremy D Edwards, Lukas A Mueller

G3 Genes|Genomes|Genetics · 06 Apr 2022 · doi:10.1093/g3journal/jkac078

data management

Low‐cost, handheld near‐infrared spectroscopy for root dry matter content prediction in cassava

Low‐cost, handheld near‐infrared spectroscopy for root dry matter content prediction in cassava

Jenna Hershberger, Edwige Gaby Nkouaya Mbanjo, Prasad Peteti, Andrew Ikpan, Kayode Ogunpaimo, Kehinde Nafiu, Ismail Y. Rabbi, Michael A. Gore

The Plant Phenome Journal · 31 Mar 2022 · doi:10.1002/ppj2.20040

spectroscopy cassava

Transcriptome‐wide association and prediction for carotenoids and tocochromanols in fresh sweet corn kernels

Transcriptome‐wide association and prediction for carotenoids and tocochromanols in fresh sweet corn kernels

Jenna Hershberger, Ryokei Tanaka, Joshua C. Wood, Nicholas Kaczmar, Di Wu, John P. Hamilton, Dean DellaPenna, C. Robin Buell, Michael A. Gore

The Plant Genome · 08 Mar 2022 · doi:10.1002/tpg2.20197

transcriptomics sweet corn nutritional quality

Re-imagining crop domestication in the era of high throughput phenomics

Re-imagining crop domestication in the era of high throughput phenomics

David L. Van Tassel, Lee R. DeHaan, Luis Diaz-Garcia, Jenna Hershberger, Matthew J. Rubin, Brandon Schlautman, Kathryn Turner, Allison J. Miller

Current Opinion in Plant Biology · 01 Feb 2022 · doi:10.1016/j.pbi.2021.102150

spectroscopy phenomic selection

2021

Prospector: A mobile application for portable, high‐throughput near‐infrared spectroscopy phenotyping

Trevor W. Rife, Chaney Courtney, Jenna Hershberger, Michael Allen Gore, Mitchell Neilsen, Jesse Poland

The Plant Phenome Journal · 22 Sep 2021 · doi:10.1002/ppj2.20024

spectroscopy data management

Making waves in Breedbase: An integrated spectral data storage and analysis pipeline for plant breeding programs

Jenna Hershberger, Nicolas Morales, Christiano C. Simoes, Bryan Ellerbrock, Guillaume Bauchet, Lukas A. Mueller, Michael A. Gore

The Plant Phenome Journal · 15 Mar 2021 · doi:10.1002/ppj2.20012

spectroscopy R data management